2015年8月20日 星期四

8.20 Some posts on FSL forum (recommended from Donna)

August 20:
AW: [FSL] AW: [FSL] FDR correction in TBSS
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1106&L=fsl&P=R40394&1=fsl&9=A&I=-3&J=on&d=No+Match%3BMatch%3BMatches&z=4

Re: TFCE-randomise and number of permutations
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind0803&L=fsl&P=R41695&1=fsl&9=A&I=-3&J=on&d=No+Match%3BMatch%3BMatches&z=4

August 18:
Re: fslstats vs fslmeants
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1411&L=fsl&P=R16798&1=fsl&9=A&I=-3&J=on&d=No+Match%3BMatch%3BMatches&z=4

Re: Extracting the actual FA values from TBSS results
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1408&L=fsl&P=R80535&1=fsl&9=A&I=-3&J=on&d=No+Match%3BMatch%3BMatches&z=4

*** Re: how to get FA value from tbss fslmeants (and labels)
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1508&L=fsl&P=R78969&1=fsl&9=A&I=-3&J=on&d=No+Match%3BMatch%3BMatches&z=4

Re: how to calculate FA values (** inside of a mask)
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1301&L=fsl&P=R145712&1=fsl&9=A&I=-3&J=on&K=4&d=No+Match%3BMatch%3BMatches&z=4

** How to visualize JHU labels in FSLVIEW and how to 'merge' with TBSS skeleton
AW: [FSL] Calculating the skeleton white matter mean FA
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1411&L=fsl&P=R60755&1=fsl&9=A&I=-3&J=on&K=2&d=No+Match%3BMatch%3BMatches&z=4

Re: FA values for each voxel
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=fsl;e892de49.1508

August 17:
Re: how to extract FA and MD values after running TBSS
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1308&L=fsl&P=R8552&1=fsl&9=A&J=on&d=No+Match%3BMatch%3BMatches&z=4

Re: about TBSS results
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1110&L=fsl&P=R34948&1=fsl&9=A&J=on&d=No+Match%3BMatch%3BMatches&z=4


Re: Display TBSS results
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind1010&L=fsl&P=R23801&1=fsl&9=A&J=on&d=No+Match%3BMatch%3BMatches&z=4

Calling an atlas in FSL:http://brainder.org/2012/07/30/automatic-atlas-queries-in-fsl/ 

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